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RCB2711 : Atg5^(-/-)MEF  update : 2018/07/06
CommentMouse embryonic fibroblasts lacking Atg5 gene expression.
Comment from the depositor
Terms and conditions1) BIOLOGICAL RESOURCE is limited to for academic researches in non-profit organization. 2) The RECIPIENT of BIOLOGICAL RESOURCE shall obtain a prior written consent on use of it from the DEPOSITOR. 3) Any use of the BIOLOGICAL RESOURCE for profit purposes by a non-profit organization or any use of the BIOLOGICAL RESOURCE by a profit organization requires a separate license from the DEPOSITOR prior to distribution. 4) In publishing research results obtained by the use of the BIOLOGICAL RESOURCE, a citation of the original publication (Nature 2004;432;1032-1036) designated by the DEPOSITOR is required. 5) In publishing the research results to be obtained by use of the BIOLOGICAL RESOURCE, an acknowledgment to the DEPOSITOR is requested. 6) The RECIPIENT must contact the DEPOSITOR in case of application for any patents or commercial use with the results from the use of BIOLOGICAL RESOURCE.
Remarks
approver's address
×
English
Address
The University of Tokyo, Graduate School of Medicine
Department of Biochemistry and Molecular Biology,Mizushima Lab.
7-3-1, Hongo, Bunkyo-ku, Tokyo, 113-0033 Japan
Dr.Mizushima, Noboru
Fax. +81-3-3815-1490
Order Form Regarding MTA between user institutions and RIKEN BRC, there are two kinds of MTA, Category I and II, depending on the sort of user institutions and the purposes of use.Please use an appropriate MTA(to see).In case of Restriction "a" or "f", please contact RIKEN BRC(cellbank.brc@riken.jp) regarding any kind of for-profit use.
Basic information Depositor Mizushima, Noboru
Originator Mizushima, Noboru
Year of deposit 2007
Another name Atg5KO_A
Animal mouse < Mammals
Strain name C57BL/6x129sv
Gender Unknown
Age at sampling embryo
Tissue embryo/fetus, whole
Case history wild type (ATG gene -/-)
Classification mutant
Recombinant recombinant
Exogene SV40 large T
Lifespan infinite
Morphology fibroblast-like
deposit info
lot info
Medium Medium List
Culture type Adherent cells
Medium and additives DMEM (low glucose) + 10% FBS
Antibiotics Free
Passage method 0.25% trypsin
Culture information Passage ratio 1 : 6-10 split
SC frequency Subculture or Medium Renewal : once/2-3 days
Temperature 37 ℃
CO2 concentration 5 %
Freeze medium Medium + 10% DMSO
Freezing method Slow freezing
Mycoplasma (-)
SSLP(mouse) OK
Isozyme LD, NP
Images
deposit info
lot info
Reference information Reference 1
User's Publication 32


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Reference
3621  Kuma A, Hatano M, Matsui M, Yamamoto A, Nakaya H, Yoshimori T, Ohsumi Y, Tokuhisa T, Mizushima N.  The role of autophagy during the early neonatal starvation period.  Nature  2004  432(7020):1032-6  PubMed ID: 15525940

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User's Publication
11371  Aki T, Unuma K, Noritake K, Hirayama N, Funakoshi T, Uemura K.  Formation of high molecular weight p62 by CORM-3.  PLoS ONE  2019    PubMed ID: 30620762
11463  Iwasawa T, Shinomiya T, Ota N, Shibata N, Nakata K, Shiina I, Nagahara Y.  Novel Ridaifen-B Structure Analog Induces Apoptosis and Autophagy Depending on Pyrrolidine Side Chain.  Biol. Pharm. Bull.  2019    PubMed ID: 30828072
5357  Takahashi D, Moriyama J, Nakamura T, Miki E, Takahashi E, Sato A, Akaike T, Itto-Nakama K, Arimoto H.  AUTACs: Cargo-Specific Degraders Using Selective Autophagy.  Mol Cell  2019  76(5):797-810  PubMed ID: 31606272
11727  Ji CH, Kim HY, Heo AJ, Lee SH, Lee MJ, Kim SB, Srinivasrao G, Mun SR, Cha-Molstad H, Ciechanover A, Choi CY, Lee HG, Kim BY, Kwon YT.  The N-Degron Pathway Mediates ER-phagy.  Mol. Cell  2019    PubMed ID: 31375263
11865  Xu ZD, Wang Y, Liang G, Liu ZQ, Ma WH, Chu CT, Wei HF.  Propofol affects mouse embryonic fibroblast survival and proliferation in vitro via ATG5- and calcium-dependent regulation of autophagy.  Acta Pharmacol. Sin.  2019    PubMed ID: 31645660
6908  Ko PJ, Woodrow C, Dubreuil MM, Martin BR, Skouta R, Bassik MC, Dixon S.  A ZDHHC5-GOLGA7 Protein Acyltransferase Complex Promotes Nonapoptotic Cell Death.  Cell Chem Biol  2019  26(12):1716-1724  PubMed ID: 31631010
9135  Kiran Bala Sharma, Manish Sharma, Suruchi Aggarwal, Amit Kumar Yadav, Shinjini Bhatnagar, Sudhanshu Vrati, Manjula Kalia  Quantitative Proteome Analysis of Atg5-Deficient Mouse Embryonic Fibroblasts Reveals the Range of the Autophagy-Modulated Basal Cellular Proteome  mSystems  2019  4 (6) 2019  PubMed ID: 31690592
9181  Huiyin Lan, Mingjia Tan, Qiang Zhang, Fei Yang, Siyuan Wang, Hua Li, Xiufang Xiong, Yi Sun  LSD1 Destabilizes FBXW7 and Abrogates FBXW7 Functions Independent of Its Demethylase Activity  Proc Natl Acad Sci U S A  2019  116 (25), 12311-12320  PubMed ID: 31152129
4148  Aki T, Unuma K, Noritake K, Kurahashi H, Funakoshi T, Uemura K.  Interaction of carbon monoxide-releasing ruthenium carbonyl CORM-3 with plasma fibronectin.  Toxicol In Vitro  2018    PubMed ID: 29580987
9173  Alexa R Wilden, Joshua A Molina, Melissa Feuerborn, Daniel Boyle, Stella Y Lee  Glutamine-dependent Lysosome Homeostatic Changes Induced by Starvation and Lysosome Inhibition  Biochim Biophys Acta Mol Cell Res  2018  1865 (9), 1356-1367  PubMed ID: 29966622
9180  Sang Mi Shim 1 2, Ha Rim Choi, Ki Woon Sung, Yoon Jee Lee, Sung Tae Kim , Daeho Kim, Su Ran Mun, Joonsung Hwang, Hyunjoo Cha-Molstad, Aaron Ciechanover, Bo Yeon Kim, Yong Tae Kwon   The Endoplasmic Reticulum-Residing Chaperone BiP Is Short-Lived and Metabolized Through N-terminal Arginylation  Sci Signal   2018  11 (511)  PubMed ID: 29295953
9185  Hyunjoo Cha-Molstad, Ji Eun Yu, Zhiwei Feng, Su Hyun Lee, Jung Gi Kim, Peng Yang, Bitnara Han, Ki Woon Sung, Young Dong Yoo, Joonsung Hwang, Terry McGuire, Sang Mi Shim, Hyun Dong Song, Srinivasrao Ganipisetti 1, Nuozhou Wang, Jun Min Jang, Min Jae Lee, Seung Jun Kim, Kyung Ho Lee 1, Jin Tae Hong, Aaron Ciechanover , Inhee Mook-Jung, Kwang Pyo Kim, Xiang-Qun Xie, Yong Tae Kwon, Bo Yeon Kim  p62/SQSTM1/Sequestosome-1 Is an N-recognin of the N-end Rule Pathway Which Modulates Autophagosome Biogenesis  Nat Commun  2017  8 (1), 102  PubMed ID: 28740232
9158  Nguyen T Tien, Ilker Karaca , Irfan Y Tamboli, Jochen Walter  Trehalose Alters Subcellular Trafficking and the Metabolism of the Alzheimer-associated Amyloid Precursor Protein  J Biol Chem  2016  291 (20), 10528-40  PubMed ID: 26957541
9136  Yuko Hirota, Shun-ichi Yamashita, Yusuke Kurihara, Xiulian Jin, Masamune Aihara, Tetsu Saigusa, Dongchon Kang, Tomotake Kanki  Mitophagy Is Primarily Due to Alternative Autophagy and Requires the MAPK1 and MAPK14 Signaling Pathways  Autophagy  2015  11 (2), 332-43  PubMed ID: 25831013
9164  Bhavya B Chandrika, Cheng Yang, Yang Ou, Xiaoke Feng, Djamali Muhoza, Alexandrea F Holmes, Sue Theus, Sarika Deshmukh, Randy S Haun, Gur P Kaushal  Endoplasmic Reticulum Stress-Induced Autophagy Provides Cytoprotection From Chemical Hypoxia and Oxidant Injury and Ameliorates Renal Ischemia-Reperfusion Injury  PLoS One   2015  10 (10), e0140025  PubMed ID: 26444017
9182  Takahiro Higuchi, Jun Nishikawa, Hiroko Inoue  Sucrose Induces Vesicle Accumulation and Autophagy  J Cell Biochem  2015  116 (4), 609-17  PubMed ID: 25389129
9111  Shintaro Kobayashi, Yasuko Orba, Hiroki Yamaguchi, Kenta Takahashi, Michihito Sasaki, Rie Hasebe, Takashi Kimura, Hirofumi Sawa  Autophagy Inhibits Viral Genome Replication and Gene Expression Stages in West Nile Virus Infection  Virus Res  2014  191, 83-91  PubMed ID: 25091564
9137  Isabelle Hamer, Emeline Goffin, Xavier De Bolle, Jean-Jacques Letesson, Michel Jadot  Replication of Brucella Abortus and Brucella Melitensis in Fibroblasts Does Not Require Atg5-dependent Macroautophagy  BMC Microbiol   2014  14, 223  PubMed ID: 25179110
9184  Bo-Jhih Guan, Dawid Krokowski, Mithu Majumder, Christine L Schmotzer, Scot R Kimball, William C Merrick, Antonis E Koromilas, Maria Hatzoglou  Translational Control During Endoplasmic Reticulum Stress Beyond Phosphorylation of the Translation Initiation Factor eIF2α  J Biol Chem  2014  289 (18), 12593-611  PubMed ID: 24648524
9151  Emi Sato, Shinichi Imafuku, Kazunari Ishii, Ryota Itoh, Bin Chou, Toshinori Soejima, Juichiro Nakayama, Kenji Hiromatsu  Vitamin D-dependent Cathelicidin Inhibits Mycobacterium Marinum Infection in Human Monocytic Cells  J Dermatol Sci  2013  70 (3), 166-72  PubMed ID: 23452544
9165  Hiroko Inoue, Katsunori Hase, Arata Segawa, Tsuyoshi Takita  H89 (N-[2-p-bromocinnamylamino-ethyl]-5-isoquinolinesulphonamide) Induces Autophagy Independently of Protein Kinase A Inhibition  Eur J Pharmacol   2013  714 (1-3), 170-7  PubMed ID: 23810683
9168  Shintaro Kobayashi, Tadaki Suzuki, Manabu Igarashi, Yasuko Orba, Noriko Ohtake, Keita Nagakawa, Kenichi Niikura, Takashi Kimura, Harumi Kasamatsu, Hirofumi Sawa  Cysteine Residues in the Major Capsid Protein, Vp1, of the JC Virus Are Important for Protein Stability and Oligomer Formation  PLoS One  2013  8 (10), e76668  PubMed ID: 24130786
9150  Yutaka Ueda, Fan-Yan Wei, Taku-ichiro Hide, Hiroyuki Michiue, Kentaro Takayama, Taku Kaitsuka, Hideo Nakamura, Keishi Makino, Jun-ichi Kuratsu, Shiroh Futaki, Kazuhito Tomizawa  Induction of Autophagic Cell Death of Glioma-Initiating Cells by Cell-Penetrating D-isomer Peptides Consisting of Pas and the p53 C-terminus  Biomaterials  2012  33 (35), 9061-9  PubMed ID: 23006589
9153  Satoshi Tsuyuki, Sayuri Fukui, Akari Watanabe, Satoshi Akune, Mizuki Tanabe, Kenichi Yoshida  Delphinidin Induces Autolysosome as Well as Autophagosome Formation and Delphinidin-Induced Autophagy Exerts a Cell Protective Role  J Biochem Mol Toxicol  2012  26 (11), 445-53  PubMed ID: 23129091
9154  Kai Er Eng, Marc D Panas, Deirdre Murphy, Gunilla B Karlsson Hedestam, Gerald M McInerney  Accumulation of Autophagosomes in Semliki Forest Virus-Infected Cells Is Dependent on Expression of the Viral Glycoproteins  J Virol  2012  86 (10), 5674-85  PubMed ID: 22438538
7903  Tian Y, Bustos V, Flajolet M, Greengard P.  A small-molecule enhancer of autophagy decreases levels of Abeta and APP-CTF via Atg5-dependent autophagy pathway.  FASEB J.  2011  25:1934-42  PubMed ID: 21368103
7963  Tamboli IY, Hampel H, Tien NT, Tolksdorf K, Breiden B, Mathews PM, Saftig P, Sandhoff K, Walter J.  Sphingolipid storage affects autophagic metabolism of the amyloid precursor protein and promotes Abeta generation.  J. Neurosci.  2011  31:1837-49  PubMed ID: 21289194
9148  Chengqun Huang, Allen M Andres, Eric P Ratliff, Genaro Hernandez, Pamela Lee, Roberta A Gottlieb  Preconditioning Involves Selective Mitophagy Mediated by Parkin and p62/SQSTM1  PLoS One  2011  6 (6), e20975  PubMed ID: 21687634
9152  Natura Myeku, Maria E Figueiredo-Pereira  Dynamics of the Degradation of Ubiquitinated Proteins by Proteasomes and Autophagy: Association With Sequestosome 1/p62  J Biol Chem  2011  286 (25), 22426-40  PubMed ID: 21536669
9163  Amy Colleran 1, Aideen Ryan, Angela O'Gorman, Coralie Mureau, Catherine Liptrot, Peter Dockery, Howard Fearnhead, Laurence J Egan  Autophagosomal IkappaB Alpha Degradation Plays a Role in the Long Term Control of Tumor Necrosis Factor-Alpha-Induced Nuclear factor-kappaB (NF-kappaB) Activity  J Biol Chem  2011  286 (26), 22886-93  PubMed ID: 21454695
8269  Eng KE, Panas MD, Karlsson Hedestam GB, McInerney GM.  A novel quantitative flow cytometry-based assay for autophagy.  Autophagy  2010  6:634-41  PubMed ID: 20458170
9178  Srikanth Chiliveru, Svend Birkelund, Søren R Paludan  Induction of Interferon-Stimulated Genes by Chlamydia Pneumoniae in Fibroblasts Is Mediated by Intracellular Nucleotide-Sensing Receptors  PLoS One  2010  5 (4), e10005  PubMed ID: 20386592



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